Schoharie County is a county in the U.S. state of New York. As of the 2010 census, the population was 32,749, making it the state's fifth-least populous county. The county seat is Schoharie. Schoharie comes from a Mohawk word meaning floating driftwood. Schoharie County is part of the Albany-Schenectady-Troy, NY Metropolitan Statistical Area. Continue reading... From Wikipedia, the free encyclopedia.